MLOC_20560 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains44.552866.57669.39760
LEAShoots from the seedlings (10 cm shoot stage)76.804170.201857.14720
INF1Young developing inflorescences (5mm)35.522531.87425.28370
INF2Developing inflorescences (1-1.5 cm)16.332817.879217.28190
ROORoots from the seedlings (10 cm shoot stage)23.900729.034236.09830
NODDeveloping tillers at six leaf stage, 3rd internode13.05317.2089911.81060
CAR5Developing grain, bracts removed (5 DPA)59.639955.709958.99070
CAR15Developing grain, bracts removed (15 DPA)11.91979.548538.250860



CDS Structure of MLOC_20560






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK358310
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK358310CUST_19949_PI427708080NoneNoneNone
MLOC_20560.1NoneAvailableNonecontig_159053 (Mapped)
MLOC_3799.1NoneAvailableAvailablecontig_133539 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----