- Predicted Gene MLOC_20558
MLOC_20558 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 47.1905 | 69.2173 | 55.1385 | 76.6265 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 44.9426 | 24.1669 | 21.8403 | 27.0224 |
| INF1 | Young developing inflorescences (5mm) | 23.2115 | 20.76 | 22.1162 | 22.7014 |
| INF2 | Developing inflorescences (1-1.5 cm) | 20.1858 | 18.6123 | 19.917 | 26.1819 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 55.9213 | 45.2044 | 63.4325 | 71.4621 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 128.572 | 124.977 | 78.8731 | 363.328 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 40.6396 | 54.1802 | 33.0815 | 54.3829 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 6.66786 | 3.02658 | 4.15623 | 12.8142 |
CDS Structure of MLOC_20558
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_20558.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g01300.3 |
-2 |
6e-14 |
71 |
71/93 (76%) |
13104.m00040 protein OsRhmbd10 - Putative Rhomboid homologue, expressed |
| TAIR PP10 | None | - | - | - | - | - |