MLOC_2053 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains23.485915.910916.047117.3644
LEAShoots from the seedlings (10 cm shoot stage)16.16299.7339914.45711.6263
INF1Young developing inflorescences (5mm)25.810426.432525.637320.4125
INF2Developing inflorescences (1-1.5 cm)14.986816.789615.221215.8617
ROORoots from the seedlings (10 cm shoot stage)12.067816.34716.122917.4593
NODDeveloping tillers at six leaf stage, 3rd internode4.776517.9901916.26431.7449
CAR5Developing grain, bracts removed (5 DPA)15.661417.196616.386714.0062
CAR15Developing grain, bracts removed (15 DPA)6.803685.342194.1878611.9639



CDS Structure of MLOC_2053






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK249886.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249886.1CUST_23299_PI427708080NoneNoneNone
MLOC_2053.1NoneAvailableAvailablecontig_11817 (Mapped)
MLOC_79403.1NoneAvailableNonecontig_848502 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----