MLOC_20499 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains30.464117.921821.02620
LEAShoots from the seedlings (10 cm shoot stage)13.05712.539118.22670
INF1Young developing inflorescences (5mm)41.467443.508849.19790
INF2Developing inflorescences (1-1.5 cm)34.357232.918132.54270
ROORoots from the seedlings (10 cm shoot stage)15.771918.568219.0250
NODDeveloping tillers at six leaf stage, 3rd internode3.056994.6062613.42180
CAR5Developing grain, bracts removed (5 DPA)15.964116.892115.54790
CAR15Developing grain, bracts removed (15 DPA)5.976186.516054.981510



CDS Structure of MLOC_20499






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK248292.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248292.1CUST_18536_PI427708080NoneNoneNone
MLOC_14924.2NoneAvailableAvailablecontig_1569427 (Mapped)
MLOC_20499.1NoneAvailableNonecontig_1590176 (Mapped)
MLOC_71872.1NoneAvailableNonecontig_60632 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----