- Predicted Gene MLOC_20489
MLOC_20489 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_20489_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_20489_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 203.766 | 218.969 | 188.394 | 203.405 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 70.7104 | 7.15859 | 8.86947 | 23.0356 |
INF1 | Young developing inflorescences (5mm) | 537.108 | 547.885 | 531.122 | 462.178 |
INF2 | Developing inflorescences (1-1.5 cm) | 421.923 | 484.261 | 388.582 | 508.665 |
ROO | Roots from the seedlings (10 cm shoot stage) | 72.1252 | 78.6077 | 171.759 | 97.7755 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.624781 | 0.509968 | 0.976824 | 1.37652 |
CAR5 | Developing grain, bracts removed (5 DPA) | 149.466 | 169.524 | 137.174 | 160.995 |
CAR15 | Developing grain, bracts removed (15 DPA) | 8.29652 | 4.22248 | 7.83971 | 15.6878 |
CDS Structure of MLOC_20489
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_20489.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g37780.1 |
+3 |
1e-19 |
81 |
39/40 (98%) |
13104.m03615 protein histone H3.3a, putative, expressed |
TAIR PP10 |
AT4G40030.2 |
+3 |
2e-20 |
84 |
41/45 (91%) |
Histone superfamily protein | chr4:18555840-18556827 REVERSE LENGTH=164 |