MLOC_20478 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1213.221137.941129.660
LEAShoots from the seedlings (10 cm shoot stage)436.70939.677152.25730
INF1Young developing inflorescences (5mm)3179.413109.533255.30
INF2Developing inflorescences (1-1.5 cm)2724.333120.752288.450
ROORoots from the seedlings (10 cm shoot stage)602.869588.973746.8220
NODDeveloping tillers at six leaf stage, 3rd internode4.62982.098811.434940
CAR5Developing grain, bracts removed (5 DPA)453.221479.502479.380
CAR15Developing grain, bracts removed (15 DPA)67.04445.288861.01570



CDS Structure of MLOC_20478






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK252601.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252601.1CUST_19170_PI427708080NoneNoneNone
MLOC_20478.1NoneAvailableNonecontig_1590057 (Mapped)
MLOC_33483.1NoneAvailableAvailablecontig_237770 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----