- Predicted Gene MLOC_20444
MLOC_20444 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_20444_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_20444_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 179.593 | 85.0011 | 81.3542 | 89.5889 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 78.251 | 46.7691 | 73.2798 | 43.8656 |
INF1 | Young developing inflorescences (5mm) | 139.949 | 154.585 | 154.199 | 94.7037 |
INF2 | Developing inflorescences (1-1.5 cm) | 100.087 | 128.225 | 101.825 | 93.031 |
ROO | Roots from the seedlings (10 cm shoot stage) | 129.54 | 96.2179 | 74.5152 | 84.1369 |
NOD | Developing tillers at six leaf stage, 3rd internode | 22.2969 | 30.3145 | 51.4839 | 72.1537 |
CAR5 | Developing grain, bracts removed (5 DPA) | 151.216 | 147.216 | 150.816 | 105.488 |
CAR15 | Developing grain, bracts removed (15 DPA) | 62.5989 | 49.4569 | 42.6776 | 96.0392 |
CDS Structure of MLOC_20444
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_20444.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g32030.1 |
-1 |
2e-86 |
285 |
140/147 (95%) |
13102.m03460 protein elongation factor, putative, expressed |
TAIR PP10 |
AT1G56070.1 |
-1 |
3e-81 |
270 |
130/148 (88%) |
| Symbols: LOS1 | Ribosomal protein S5/Elongation factor G/III/V family protein | chr1:20968245-20971077 REVERSE LENGTH=843 |