MLOC_20425 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains241.343183.898180.2730
LEAShoots from the seedlings (10 cm shoot stage)129.28415.264518.87230
INF1Young developing inflorescences (5mm)720.715735.789760.4350
INF2Developing inflorescences (1-1.5 cm)536.57763.538613.5910
ROORoots from the seedlings (10 cm shoot stage)115.823169.057215.7440
NODDeveloping tillers at six leaf stage, 3rd internode1.051031.043871.500490
CAR5Developing grain, bracts removed (5 DPA)120.773147.155119.1220
CAR15Developing grain, bracts removed (15 DPA)13.36110.031315.81460



CDS Structure of MLOC_20425






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK249420.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249420.1CUST_18692_PI427708080NoneNoneNone
MLOC_16047.1NoneAvailableAvailablecontig_1572232 (Mapped)
MLOC_20425.1NoneAvailableNonecontig_1589751 (Mapped)
MLOC_79032.1NoneAvailableNonecontig_830437 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----