- Predicted Gene MLOC_20411
MLOC_20411 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 9.14217 | 26.9999 | 22.9358 | 24.0536 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 31.5616 | 24.7875 | 17.6552 | 23.2101 |
| INF1 | Young developing inflorescences (5mm) | 43.3964 | 42.1743 | 41.4839 | 38.1112 |
| INF2 | Developing inflorescences (1-1.5 cm) | 55.6114 | 48.0778 | 44.925 | 59.284 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 6.34018 | 13.7816 | 11.6049 | 18.3418 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 17.8043 | 17.3525 | 13.3686 | 66.5042 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 28.8913 | 24.1497 | 25.7777 | 28.4783 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 18.621 | 18.2407 | 16.6553 | 44.915 |
CDS Structure of MLOC_20411
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_20411.7
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g29730.1 |
+2 |
2e-39 |
150 |
82/123 (67%) |
13108.m03072 protein intracellular protein transport protein USO1-related, putative, expressed |
| TAIR PP10 |
AT2G46180.1 |
+2 |
1e-41 |
157 |
127/410 (31%) |
| Symbols: GC4 | golgin candidate 4 | chr2:18967482-18971260 REVERSE LENGTH=725 |