- Predicted Gene MLOC_20390
MLOC_20390 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.63345 | 4.24048 | 3.83714 | 3.79464 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 2.40169 | 0.810154 | 0.428799 | 1.09218 |
| INF1 | Young developing inflorescences (5mm) | 23.1218 | 23.9178 | 19.8839 | 19.1504 |
| INF2 | Developing inflorescences (1-1.5 cm) | 16.5324 | 19.0044 | 16.9769 | 19.2883 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.899431 | 2.09649 | 1.87915 | 2.42623 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.105851 | 0.159892 | 0.138201 | 0.544227 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 4.58155 | 4.27887 | 4.69837 | 4.35858 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.395549 | 0.496907 | 0.747184 | 1.10967 |
CDS Structure of MLOC_20390
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_20390.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g48360.1 |
-3 |
0.0 |
1332 |
662/898 (74%) |
13107.m05172 protein helicase conserved C-terminal domain containing protein, expressed |
| TAIR PP10 |
AT1G31360.1 |
-3 |
7e-89 |
303 |
172/422 (41%) |
| Symbols: RECQL2, ATRECQ2, MED34 | RECQ helicase L2 | chr1:11232422-11237412 FORWARD LENGTH=705 |