- Predicted Gene MLOC_20381
MLOC_20381 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_20381_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 11.7732 | 19.3495 | 20.3466 | 14.3606 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 30.9392 | 17.5293 | 20.3728 | 17.5085 |
INF1 | Young developing inflorescences (5mm) | 15.9373 | 16.3863 | 16.0092 | 11.3401 |
INF2 | Developing inflorescences (1-1.5 cm) | 15.1714 | 15.5707 | 14.9472 | 14.0455 |
ROO | Roots from the seedlings (10 cm shoot stage) | 17.133 | 23.4544 | 16.4683 | 20.8927 |
NOD | Developing tillers at six leaf stage, 3rd internode | 31.2295 | 22.879 | 23.7846 | 65.1767 |
CAR5 | Developing grain, bracts removed (5 DPA) | 29.3866 | 27.838 | 33.4939 | 23.531 |
CAR15 | Developing grain, bracts removed (15 DPA) | 28.962 | 25.8991 | 27.0055 | 52.7869 |
CDS Structure of MLOC_20381
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_20381.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g56630.1 |
-3 |
0.0 |
1030 |
552/619 (89%) |
13101.m05999 protein dymeclin, putative, expressed |
TAIR PP10 |
AT1G04200.1 |
-3 |
0.0 |
659 |
377/621 (61%) |
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dymeclin (InterPro:IPR019142); Has 395 Blast hits to 389 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 262; Fungi - 21; Plants - 68; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). | chr1:1109676-1113875 FORWARD LENGTH=732 |