MLOC_20338 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.9089890.879451.211910.988419
LEAShoots from the seedlings (10 cm shoot stage)2.013873.83797.088373.51275
INF1Young developing inflorescences (5mm)0.022536900.05595720.0509642
INF2Developing inflorescences (1-1.5 cm)0.04798040.04583010.08396920.0782082
ROORoots from the seedlings (10 cm shoot stage)2.284072.233262.791962.56281
NODDeveloping tillers at six leaf stage, 3rd internode1.296932.763536.03379.73705
CAR5Developing grain, bracts removed (5 DPA)0.9481471.159120.8025041.06305
CAR15Developing grain, bracts removed (15 DPA)0.4323540.6037080.5421951.4588



CDS Structure of MLOC_20338






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK372502
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372502CUST_25648_PI427708080NoneNoneNone
MLOC_20338.1NoneAvailableAvailablecontig_1589260 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----