- Predicted Gene MLOC_20334
MLOC_20334 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_20334_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_20334_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 7.31253 | 6.65431 | 6.78186 | 5.57154 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 5.45251 | 3.56358 | 2.57543 | 2.92525 |
INF1 | Young developing inflorescences (5mm) | 5.99199 | 9.43585 | 10.6479 | 5.45667 |
INF2 | Developing inflorescences (1-1.5 cm) | 10.4145 | 9.62229 | 11.7942 | 9.08545 |
ROO | Roots from the seedlings (10 cm shoot stage) | 6.38535 | 7.35224 | 6.08169 | 6.7732 |
NOD | Developing tillers at six leaf stage, 3rd internode | 10.807 | 10.1151 | 14.8739 | 30.0307 |
CAR5 | Developing grain, bracts removed (5 DPA) | 5.86545 | 5.82636 | 5.05979 | 4.21081 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.695649 | 1.08733 | 1.30191 | 1.61269 |
CDS Structure of MLOC_20334
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_20334.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g74330.1 |
-1 |
7e-40 |
150 |
69/79 (87%) |
13101.m08124 protein pectinacetylesterase domain containing protein, expressed |
TAIR PP10 |
AT5G23870.1 |
-1 |
3e-19 |
89 |
40/82 (49%) |
Pectinacetylesterase family protein | chr5:8046309-8049999 REVERSE LENGTH=415 |