MLOC_20310 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains34.381742.101837.885636.7817
LEAShoots from the seedlings (10 cm shoot stage)65.263945.012542.276543.8697
INF1Young developing inflorescences (5mm)56.919251.513353.253142.5933
INF2Developing inflorescences (1-1.5 cm)39.366942.048434.641540.846
ROORoots from the seedlings (10 cm shoot stage)12.979221.104117.450522.5138
NODDeveloping tillers at six leaf stage, 3rd internode16.336112.999915.347845.5494
CAR5Developing grain, bracts removed (5 DPA)18.722217.479417.056116.0612
CAR15Developing grain, bracts removed (15 DPA)8.649247.379828.5828416.6561



CDS Structure of MLOC_20310






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_20310.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_20310.1NoneAvailableAvailablecontig_1589116 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g08280.1 +1 5e-56 189 95/130 (73%) 13112.m00877 protein inositol-1-monophosphatase, putative, expressed
TAIR PP10 AT5G63980.1 +1 1e-45 161 85/148 (57%) | Symbols: SAL1, ALX8, ATSAL1, HOS2, FRY1, RON1 | Inositol monophosphatase family protein | chr5:25609840-25611802 FORWARD LENGTH=407