- Predicted Gene MLOC_20309
MLOC_20309 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_20309_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_20309_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 28.2553 | 11.7674 | 15.3453 | 14.7151 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 13.6361 | 2.14108 | 2.55997 | 5.38988 |
INF1 | Young developing inflorescences (5mm) | 34.3714 | 37.5724 | 39.3157 | 26.6641 |
INF2 | Developing inflorescences (1-1.5 cm) | 25.7368 | 32.3256 | 27.191 | 26.243 |
ROO | Roots from the seedlings (10 cm shoot stage) | 21.051 | 9.48755 | 14.7677 | 11.3617 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.38171 | 2.14101 | 1.75243 | 5.48932 |
CAR5 | Developing grain, bracts removed (5 DPA) | 9.90146 | 11.4294 | 12.1008 | 8.77932 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.51631 | 1.24411 | 1.17502 | 2.81987 |
CDS Structure of MLOC_20309
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_20309.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g38560.1 |
-1 |
2e-18 |
81 |
40/41 (98%) |
13105.m04047 protein Core histone H2A/H2B/H3/H4 domain containing protein, putative |
TAIR PP10 |
AT3G09480.1 |
-1 |
3e-18 |
80 |
39/41 (95%) |
Histone superfamily protein | chr3:2914890-2915270 REVERSE LENGTH=126 |