MLOC_20237 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.389614.753213.72314.7233
LEAShoots from the seedlings (10 cm shoot stage)9.705715.917554.791795.57041
INF1Young developing inflorescences (5mm)11.154510.034411.18419.8765
INF2Developing inflorescences (1-1.5 cm)7.5026.644117.67058.74834
ROORoots from the seedlings (10 cm shoot stage)13.598118.406919.071322.227
NODDeveloping tillers at six leaf stage, 3rd internode34.873411.046620.346135.2052
CAR5Developing grain, bracts removed (5 DPA)22.633923.296421.055424.9999
CAR15Developing grain, bracts removed (15 DPA)7.646915.979496.8582817.8051



CDS Structure of MLOC_20237






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_20237.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_20237.1CUST_11640_PI427708083AvailableAvailablecontig_1588721 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g54160.2 +3 4e-11 65 62/99 (63%) 13102.m12340 protein AP2 domain containing protein, expressed
TAIR PP10None-----