- Predicted Gene MLOC_20236
MLOC_20236 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 74.623 | 46.0933 | 59.2129 | 71.2258 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 41.6478 | 23.7311 | 29.5879 | 33.1478 |
| INF1 | Young developing inflorescences (5mm) | 65.8473 | 64.212 | 73.6899 | 74.5856 |
| INF2 | Developing inflorescences (1-1.5 cm) | 61.1878 | 51.2637 | 48.2123 | 74.2341 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 60.5562 | 41.7364 | 77.1991 | 81.3255 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 11.4749 | 7.90525 | 16.9625 | 44.2048 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 51.0513 | 44.0768 | 55.8563 | 63.7644 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 21.7785 | 18.6276 | 15.6654 | 55.158 |
CDS Structure of MLOC_20236
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_20236.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g39500.1 |
-1 |
9e-36 |
120 |
63/69 (91%) |
13109.m03961 protein ubiquitin fusion protein, putative, expressed |
| TAIR PP10 |
AT3G52590.1 |
-1 |
4e-36 |
120 |
63/69 (91%) |
| Symbols: UBQ1, EMB2167, ERD16, HAP4 | ubiquitin extension protein 1 | chr3:19505668-19506681 FORWARD LENGTH=128 |