MLOC_20211 FPKM values

FPKM by Treatment	FPKM by Replicate

Treatment ID	Treatment Description	Rep 1 FPKM	Rep 2 FPKM	Rep 3 FPKM	Treatment FPKM
EMB	4-day embryos dissected from germinating grains	0.948768	0.472121	0.2193	0.521263
LEA	Shoots from the seedlings (10 cm shoot stage)	1.50348	0.597308	0.28992	0.738971
INF1	Young developing inflorescences (5mm)	0.630816	0.435891	0.855442	0.535605
INF2	Developing inflorescences (1-1.5 cm)	1.49613	1.02292	1.21417	1.37207
ROO	Roots from the seedlings (10 cm shoot stage)	0	0.717047	0	2.17955
NOD	Developing tillers at six leaf stage, 3rd internode	0.242977	0.380002	0.383405	0.926673
CAR5	Developing grain, bracts removed (5 DPA)	1.03472	1.22983	0.791568	1.0206
CAR15	Developing grain, bracts removed (15 DPA)	2.30077	1.99367	2.22643	4.80683

CDS Structure of MLOC_20211

Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_20211.1

Cluster member	Probe ID	FPKM by replicate	FPKM by treatment	Source Contig
MLOC_20211.1	None	Available	Available	contig_158854 (Mapped)

Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

Database	Hit	Frame	E-value	Score	% Identity	Description
Rice PP6	LOC_Os07g29570.1	+1	5e-15	74	39/100 (39%)	13107.m02970 protein retrotransposon protein, putative, unclassified
TAIR PP10	AT5G48050.1	+1	5e-14	69	36/116 (31%)	CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:19472661-19473770 REVERSE LENGTH=369