- Predicted Gene MLOC_20110
MLOC_20110 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 7.69934 | 7.4277 | 9.16248 | 7.36592 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 20.9405 | 22.8954 | 34.0468 | 18.8078 |
| INF1 | Young developing inflorescences (5mm) | 1.76506 | 1.04866 | 0.891074 | 1.05788 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.613045 | 0.502533 | 0.586823 | 0.616749 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 6.76503 | 5.26134 | 3.12878 | 5.03933 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 18.0412 | 23.6033 | 12.9762 | 46.7072 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 6.17432 | 5.3824 | 5.56591 | 5.4123 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.24698 | 0.173093 | 0.786937 | 0.86719 |
CDS Structure of MLOC_20110
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_20110.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g14170.1 |
+3 |
0.0 |
942 |
475/539 (88%) |
13103.m01659 protein 3-ketoacyl-CoA synthase, putative, expressed |
| TAIR PP10 |
AT1G01120.1 |
+3 |
0.0 |
635 |
319/507 (63%) |
| Symbols: KCS1 | 3-ketoacyl-CoA synthase 1 | chr1:57392-58978 REVERSE LENGTH=528 |
