MLOC_2011 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_2011_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_2011_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 7.88035 | 11.3461 | 6.99592 | 9.82573 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.80532 | 1.36552 | 3.49946 | 2.69343 |
INF1 | Young developing inflorescences (5mm) | 11.1862 | 12.3078 | 16.3087 | 11.2129 |
INF2 | Developing inflorescences (1-1.5 cm) | 14.9575 | 12.5922 | 9.2727 | 14.3088 |
ROO | Roots from the seedlings (10 cm shoot stage) | 5.74094 | 4.64431 | 5.98646 | 6.19942 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.306514 | 2.33411 | 1.99146 | 7.74564 |
CAR5 | Developing grain, bracts removed (5 DPA) | 6.54547 | 6.10082 | 5.75231 | 6.07387 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.19883 | 3.41445 | 5.84596 | 8.88577 |
CDS Structure of MLOC_2011
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_2011.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g08060.1 |
+2 |
3e-44 |
90 |
43/45 (96%) |
13103.m30165 protein elongation factor Tu, putative, expressed |
TAIR PP10 |
AT5G60390.3 |
+2 |
1e-42 |
89 |
43/45 (96%) |
GTP binding Elongation factor Tu family protein | chr5:24289226-24290675 FORWARD LENGTH=449 |