MLOC_20088 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.1640514.996310.91630
LEAShoots from the seedlings (10 cm shoot stage)16.966613.024410.57660
INF1Young developing inflorescences (5mm)18.888320.329515.55550
INF2Developing inflorescences (1-1.5 cm)25.897423.659718.78230
ROORoots from the seedlings (10 cm shoot stage)7.2243213.093711.16540
NODDeveloping tillers at six leaf stage, 3rd internode10.65169.643787.538160
CAR5Developing grain, bracts removed (5 DPA)14.411411.632111.1850
CAR15Developing grain, bracts removed (15 DPA)8.448856.108738.643110



CDS Structure of MLOC_20088






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK356235
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356235CUST_19637_PI427708080NoneNoneNone
MLOC_20088.1NoneAvailableNonecontig_158797 (Mapped)
MLOC_36523.1NoneAvailableAvailablecontig_2546915 (Mapped)
MLOC_38443.1NoneAvailableNonecontig_2550467 (Mapped)
MLOC_527.1NoneAvailableNonecontig_1037877 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----