MLOC_20085 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.7405812.23919.810288.76748
LEAShoots from the seedlings (10 cm shoot stage)13.917413.78138.231579.24719
INF1Young developing inflorescences (5mm)47.361846.746447.879833.1866
INF2Developing inflorescences (1-1.5 cm)58.461144.779749.830948.9009
ROORoots from the seedlings (10 cm shoot stage)6.2651610.548214.402310.7359
NODDeveloping tillers at six leaf stage, 3rd internode7.54899.0592527.781136.0446
CAR5Developing grain, bracts removed (5 DPA)15.975714.050313.083411.78
CAR15Developing grain, bracts removed (15 DPA)4.555294.477635.784518.90988



CDS Structure of MLOC_20085






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK367944
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367944CUST_25179_PI427708080NoneNoneNone
MLOC_20085.1NoneAvailableAvailablecontig_1587958 (Mapped)
MLOC_22748.1NoneAvailableNonecontig_161140 (Mapped)
MLOC_23273.1NoneAvailableNonecontig_16200 (Mapped)
MLOC_2420.2NoneAvailableNonecontig_1215070 (Not mapped)
MLOC_24572.1NoneAvailableNonecontig_1647934 (Mapped)
MLOC_27420.1NoneAvailableNonecontig_183056 (Not mapped)
MLOC_3051.1NoneAvailableNonecontig_1274195 (Not mapped)
MLOC_31617.1NoneAvailableNonecontig_2205597 (Not mapped)
MLOC_34277.1NoneAvailableNonecontig_2431736 (Not mapped)
MLOC_47594.1NoneAvailableNonecontig_308687 (Not mapped)
MLOC_48361.1NoneAvailableNonecontig_322117 (Mapped)
MLOC_62871.1NoneAvailableNonecontig_470503 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----