- Predicted Gene MLOC_20083
MLOC_20083 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.00258 | 1.27048 | 1.14523 | 1.2577 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.429995 | 0.365116 | 0.548372 | 0.453989 |
| INF1 | Young developing inflorescences (5mm) | 0.946686 | 0.718325 | 1.21871 | 0.886019 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.884694 | 0.957606 | 0.778849 | 1.08465 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.319514 | 0.53371 | 0.676061 | 0.680979 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.645317 | 0.435605 | 0.480014 | 1.49584 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 2.41976 | 3.32219 | 3.12566 | 3.13501 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.34026 | 2.65693 | 2.49217 | 6.02936 |
CDS Structure of MLOC_20083
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_20083.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g46610.1 |
+3 |
0.0 |
647 |
326/396 (82%) |
13103.m05016 protein DEAD-box ATP-dependent RNA helicase, putative, expressed |
| TAIR PP10 |
AT5G60990.1 |
+3 |
0.0 |
533 |
263/406 (65%) |
DEA(D/H)-box RNA helicase family protein | chr5:24546601-24549148 REVERSE LENGTH=456 |