- Predicted Gene MLOC_20061
MLOC_20061 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_20061_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_20061_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 26.1084 | 40.4182 | 54.4944 | 36.8217 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 164.903 | 131.75 | 98.6179 | 106.026 |
INF1 | Young developing inflorescences (5mm) | 45.3219 | 23.5121 | 15.0374 | 23.9235 |
INF2 | Developing inflorescences (1-1.5 cm) | 27.5353 | 26.6669 | 28.6752 | 29.3102 |
ROO | Roots from the seedlings (10 cm shoot stage) | 18.782 | 50.7777 | 24.8294 | 47.4484 |
NOD | Developing tillers at six leaf stage, 3rd internode | 263.167 | 115.945 | 201.925 | 393.579 |
CAR5 | Developing grain, bracts removed (5 DPA) | 320.045 | 347.671 | 289.758 | 295.971 |
CAR15 | Developing grain, bracts removed (15 DPA) | 13.4548 | 13.4391 | 15.7095 | 29.9804 |
CDS Structure of MLOC_20061
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_20061.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g20380.8 |
+1 |
4e-24 |
96 |
48/50 (96%) |
13103.m12974 protein CAMK_KIN1/SNF1/Nim1_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
TAIR PP10 |
AT2G26980.2 |
+1 |
1e-14 |
69 |
32/39 (82%) |
| Symbols: CIPK3 | CBL-interacting protein kinase 3 | chr2:11515626-11518205 REVERSE LENGTH=375 |