- Predicted Gene MLOC_20051
MLOC_20051 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 56.5008 | 39.6461 | 37.744 | 45.789 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 19.4098 | 13.0945 | 22.8828 | 16.484 |
| INF1 | Young developing inflorescences (5mm) | 34.5188 | 40.3771 | 41.5526 | 34.4481 |
| INF2 | Developing inflorescences (1-1.5 cm) | 28.2397 | 26.2682 | 27.4248 | 31.245 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 50.5603 | 29.8941 | 35.3603 | 42.2866 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 5.36649 | 7.93467 | 10.3592 | 26.4096 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 18.8651 | 20.3238 | 21.4024 | 20.8572 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 7.86473 | 8.58095 | 7.76123 | 19.488 |
CDS Structure of MLOC_20051
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_20051.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g61019.1 |
-3 |
1e-40 |
135 |
63/79 (80%) |
13103.m06704 protein mitochondrial import inner membrane translocase subunit Tim, putative, expressed |
| TAIR PP10 |
AT2G29530.2 |
-3 |
7e-31 |
109 |
48/66 (73%) |
| Symbols: TIM10 | Tim10/DDP family zinc finger protein | chr2:12641026-12642243 REVERSE LENGTH=83 |