MLOC_20049 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.978326.946946.084840
LEAShoots from the seedlings (10 cm shoot stage)4.704262.265393.099540
INF1Young developing inflorescences (5mm)6.719599.735878.249570
INF2Developing inflorescences (1-1.5 cm)6.087919.461637.412390
ROORoots from the seedlings (10 cm shoot stage)4.255646.219367.252350
NODDeveloping tillers at six leaf stage, 3rd internode9.332216.431597.31430
CAR5Developing grain, bracts removed (5 DPA)6.224287.84035.320880
CAR15Developing grain, bracts removed (15 DPA)1.136320.7146120.8540360



CDS Structure of MLOC_20049






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK364134
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364134CUST_20840_PI427708080NoneNoneNone
MLOC_20049.1NoneAvailableNonecontig_158775 (Mapped)
MLOC_20050.1NoneAvailableAvailablecontig_158775 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----