- Predicted Gene MLOC_20017
MLOC_20017 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 23.07 | 14.9647 | 16.5667 | 16.3374 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 16.7129 | 16.701 | 21.7526 | 14.3305 |
| INF1 | Young developing inflorescences (5mm) | 10.8427 | 11.4939 | 9.38901 | 7.99072 |
| INF2 | Developing inflorescences (1-1.5 cm) | 7.76312 | 11.3209 | 8.95671 | 9.09788 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 21.6875 | 19.9245 | 16.1275 | 21.0613 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 17.2138 | 18.9312 | 20.9345 | 56.7898 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 12.3485 | 14.7952 | 13.983 | 11.5591 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 25.1578 | 24.6648 | 24.7683 | 47.5378 |
CDS Structure of MLOC_20017
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_20017.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g29610.1 |
-3 |
2e-109 |
329 |
179/232 (77%) |
13107.m02976 protein PQ loop repeat domain containing protein, expressed |
| TAIR PP10 |
AT4G07390.1 |
-3 |
6e-88 |
272 |
142/219 (65%) |
Mannose-P-dolichol utilization defect 1 protein | chr4:4195750-4197317 FORWARD LENGTH=235 |