MLOC_19998 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.830110.38598.686812.6938
LEAShoots from the seedlings (10 cm shoot stage)3.924630.25050.3297441.36627
INF1Young developing inflorescences (5mm)27.313925.748923.793425.6786
INF2Developing inflorescences (1-1.5 cm)22.015127.254921.775632.2358
ROORoots from the seedlings (10 cm shoot stage)4.785184.438557.614987.46772
NODDeveloping tillers at six leaf stage, 3rd internode0.1138550.1536850.05140360.485615
CAR5Developing grain, bracts removed (5 DPA)5.613946.080054.729056.63567
CAR15Developing grain, bracts removed (15 DPA)0.322280.2173070.2989590.807608



CDS Structure of MLOC_19998






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_19998.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_19998.1NoneAvailableAvailablecontig_1587524 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g37780.1 -3 2e-12 63 31/31 (100%) 13104.m03615 protein histone H3.3a, putative, expressed
TAIR PP10 AT5G10980.1 -3 4e-12 63 31/31 (100%) Histone superfamily protein | chr5:3472591-3473349 REVERSE LENGTH=136