- Predicted Gene MLOC_19998
MLOC_19998 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_19998_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_19998_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 10.8301 | 10.3859 | 8.6868 | 12.6938 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.92463 | 0.2505 | 0.329744 | 1.36627 |
INF1 | Young developing inflorescences (5mm) | 27.3139 | 25.7489 | 23.7934 | 25.6786 |
INF2 | Developing inflorescences (1-1.5 cm) | 22.0151 | 27.2549 | 21.7756 | 32.2358 |
ROO | Roots from the seedlings (10 cm shoot stage) | 4.78518 | 4.43855 | 7.61498 | 7.46772 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.113855 | 0.153685 | 0.0514036 | 0.485615 |
CAR5 | Developing grain, bracts removed (5 DPA) | 5.61394 | 6.08005 | 4.72905 | 6.63567 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.32228 | 0.217307 | 0.298959 | 0.807608 |
CDS Structure of MLOC_19998
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_19998.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g37780.1 |
-3 |
2e-12 |
63 |
31/31 (100%) |
13104.m03615 protein histone H3.3a, putative, expressed |
TAIR PP10 |
AT5G10980.1 |
-3 |
4e-12 |
63 |
31/31 (100%) |
Histone superfamily protein | chr5:3472591-3473349 REVERSE LENGTH=136 |