MLOC_19965 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains118.89797.5684105.26192.1675
LEAShoots from the seedlings (10 cm shoot stage)132.683155.461199.562116.616
INF1Young developing inflorescences (5mm)51.480160.228858.302543.9037
INF2Developing inflorescences (1-1.5 cm)76.333875.69668.861573.6035
ROORoots from the seedlings (10 cm shoot stage)306.97191.947159.584198.756
NODDeveloping tillers at six leaf stage, 3rd internode141.069235.265207.175617.357
CAR5Developing grain, bracts removed (5 DPA)114.059105.325109.43193.5814
CAR15Developing grain, bracts removed (15 DPA)42.828547.009640.632795.0878



CDS Structure of MLOC_19965






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_19965.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_19965.1CUST_9842_PI427708080AvailableAvailablecontig_158736 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g54990.2 +1 0.0 674 368/392 (94%) 13102.m06298 protein TMS membrane protein/tumour differentially expressed protein, putative, expressed
TAIR PP10 AT1G16180.2 +1 0.0 583 306/392 (78%) Serinc-domain containing serine and sphingolipid biosynthesis protein | chr1:5540905-5542670 FORWARD LENGTH=412