- Predicted Gene MLOC_19934
MLOC_19934 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 7.76472 | 9.95018 | 8.55421 | 8.06586 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 8.20125 | 6.75108 | 5.50769 | 5.39816 |
| INF1 | Young developing inflorescences (5mm) | 32.2945 | 35.4022 | 32.6776 | 24.6761 |
| INF2 | Developing inflorescences (1-1.5 cm) | 30.7704 | 34.503 | 29.9482 | 31.3572 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 4.49603 | 8.75754 | 5.55164 | 8.19982 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.31569 | 2.10859 | 4.02983 | 7.38797 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 20.3118 | 18.8363 | 21.1847 | 17.1166 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 5.25696 | 5.35128 | 4.63332 | 10.3766 |
CDS Structure of MLOC_19934
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_19934.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g26160.2 |
-3 |
0.0 |
680 |
370/450 (82%) |
13101.m02770 protein exportin 1, putative, expressed |
| TAIR PP10 |
AT3G05040.1 |
-3 |
6e-145 |
449 |
262/475 (55%) |
| Symbols: HST, HST1 | ARM repeat superfamily protein | chr3:1401479-1408095 REVERSE LENGTH=1202 |