MLOC_1991 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains17.963136.700931.23590
LEAShoots from the seedlings (10 cm shoot stage)113.957232.853167.210
INF1Young developing inflorescences (5mm)24.482421.167716.49280
INF2Developing inflorescences (1-1.5 cm)9.480845.249418.353120
ROORoots from the seedlings (10 cm shoot stage)1.894987.771478.596310
NODDeveloping tillers at six leaf stage, 3rd internode24.199810.395229.20230
CAR5Developing grain, bracts removed (5 DPA)13.786819.068417.78480
CAR15Developing grain, bracts removed (15 DPA)7.536465.332552.133620



CDS Structure of MLOC_1991






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK361271
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361271CUST_24421_PI427708080NoneNoneNone
MLOC_1991.1NoneAvailableNonecontig_1177347 (Not mapped)
MLOC_32353.1NoneAvailableNonecontig_227831 (Mapped)
MLOC_33601.1NoneAvailableNonecontig_2388840 (Not mapped)
MLOC_49861.1NoneAvailableNonecontig_349772 (Mapped)
MLOC_72596.3NoneAvailableAvailablecontig_61954 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----