MLOC_19854 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.154019.158428.350578.38023
LEAShoots from the seedlings (10 cm shoot stage)1.003511.944241.45591.287
INF1Young developing inflorescences (5mm)3.330923.829174.780963.34849
INF2Developing inflorescences (1-1.5 cm)2.803992.793847.541544.22864
ROORoots from the seedlings (10 cm shoot stage)12.528913.06869.0411616.094
NODDeveloping tillers at six leaf stage, 3rd internode0.3167560.496840.2264671.64038
CAR5Developing grain, bracts removed (5 DPA)1.265011.289991.159851.22639
CAR15Developing grain, bracts removed (15 DPA)0.7704350.7808410.7933171.79908



CDS Structure of MLOC_19854






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_19854.5
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366277NoneNoneNoneNone
MLOC_19854.5CUST_1866_PI427708080AvailableAvailablecontig_158683 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g05270.1 +1 0.0 689 325/423 (77%) 13105.m00546 protein sucrose-phosphatase, putative, expressed
TAIR PP10 AT2G35840.3 +1 8e-165 490 241/424 (57%) Sucrose-6F-phosphate phosphohydrolase family protein | chr2:15053952-15055776 FORWARD LENGTH=422