- Predicted Gene MLOC_19842
MLOC_19842 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 15.8655 | 6.68832 | 13.8549 | 8.80675 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 5.41178 | 8.30542 | 13.0067 | 5.7245 |
INF1 | Young developing inflorescences (5mm) | 3.26604 | 3.43773 | 4.49635 | 2.34694 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.79516 | 2.01757 | 1.25783 | 1.61521 |
ROO | Roots from the seedlings (10 cm shoot stage) | 18.7988 | 6.15587 | 7.7251 | 8.78292 |
NOD | Developing tillers at six leaf stage, 3rd internode | 7.0626 | 9.45388 | 12.7547 | 25.0474 |
CAR5 | Developing grain, bracts removed (5 DPA) | 5.43352 | 6.4519 | 6.80154 | 4.83293 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.76716 | 1.29728 | 1.87324 | 2.99706 |
CDS Structure of MLOC_19842
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_19842.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g06720.1 |
-1 |
5e-58 |
191 |
92/109 (84%) |
13106.m00694 protein flavonol synthase/flavanone 3-hydroxylase, putative, expressed |
TAIR PP10 |
AT4G16330.1 |
-1 |
5e-45 |
153 |
72/109 (66%) |
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr4:9226298-9227235 REVERSE LENGTH=258 |