- Predicted Gene MLOC_19815
MLOC_19815 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_19815_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_19815_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 77.6876 | 119.011 | 101.721 | 91.8785 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 69.5687 | 62.8053 | 62.2514 | 45.6484 |
INF1 | Young developing inflorescences (5mm) | 79.5715 | 78.2241 | 69.3121 | 62.4451 |
INF2 | Developing inflorescences (1-1.5 cm) | 79.4165 | 76.9518 | 67.6787 | 79.6656 |
ROO | Roots from the seedlings (10 cm shoot stage) | 53.6443 | 96.7979 | 75.0916 | 85.5204 |
NOD | Developing tillers at six leaf stage, 3rd internode | 65.4926 | 30.7463 | 19.882 | 58.6264 |
CAR5 | Developing grain, bracts removed (5 DPA) | 55.838 | 68.2919 | 61.9439 | 58.5683 |
CAR15 | Developing grain, bracts removed (15 DPA) | 9.65891 | 10.4958 | 10.5924 | 22.7569 |
CDS Structure of MLOC_19815
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_19815.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g43730.1 |
+2 |
2e-12 |
66 |
35/40 (88%) |
13112.m04613 protein expressed protein |
TAIR PP10 |
AT5G09550.1 |
+2 |
1e-11 |
62 |
30/30 (100%) |
GDP dissociation inhibitor family protein / Rab GTPase activator family protein | chr5:2963850-2966465 FORWARD LENGTH=445 |