- Predicted Gene MLOC_19810
MLOC_19810 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.10088 | 0.795654 | 0.512695 | 0.782171 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.605156 | 0.4368 | 0.477071 | 0.407325 |
| INF1 | Young developing inflorescences (5mm) | 1.15668 | 1.37912 | 2.00567 | 1.14297 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1.6463 | 1.77259 | 1.7141 | 1.73262 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.147432 | 0.434045 | 0.243872 | 0.392424 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.163127 | 0.347726 | 0.792373 | 1.17053 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.99031 | 0.833908 | 0.952374 | 0.814533 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.366577 | 0.330887 | 0.321897 | 0.741158 |
CDS Structure of MLOC_19810
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_19810.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g39810.1 |
-3 |
6e-134 |
322 |
158/321 (49%) |
13105.m04199 protein retrotransposon protein, putative, unclassified |
| TAIR PP10 |
AT3G24255.1 |
-3 |
3e-13 |
74 |
44/139 (32%) |
RNA-directed DNA polymerase (reverse transcriptase)-related family protein | chr3:8789471-8793208 FORWARD LENGTH=746 |