MLOC_19780 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.32811401.045330
LEAShoots from the seedlings (10 cm shoot stage)0.4836170.2668850.2428080
INF1Young developing inflorescences (5mm)0.4203750.8558811.164090
INF2Developing inflorescences (1-1.5 cm)0.3824340.4914870.3286350
ROORoots from the seedlings (10 cm shoot stage)0.5531470.16823300
NODDeveloping tillers at six leaf stage, 3rd internode0.1179540.2720740.4448580
CAR5Developing grain, bracts removed (5 DPA)0.3198140.1449470.1668980
CAR15Developing grain, bracts removed (15 DPA)00.4837050.6575230



CDS Structure of MLOC_19780






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK364073
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364073CUST_20826_PI427708080NoneNoneNone
MLOC_19780.1NoneAvailableNonecontig_158642 (Mapped)
MLOC_46950.1NoneAvailableNonecontig_298336 (Mapped)
MLOC_80354.1NoneAvailableAvailablecontig_90020 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----