- Predicted Gene MLOC_19772
MLOC_19772 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_19772_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_19772_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1158.29 | 1152.16 | 1143.58 | 1202.47 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 506.134 | 474.582 | 293.033 | 371.532 |
INF1 | Young developing inflorescences (5mm) | 1351.42 | 1339.43 | 1078.64 | 1115.87 |
INF2 | Developing inflorescences (1-1.5 cm) | 867.679 | 756.636 | 775.336 | 915.397 |
ROO | Roots from the seedlings (10 cm shoot stage) | 713.635 | 680.271 | 967.099 | 896.189 |
NOD | Developing tillers at six leaf stage, 3rd internode | 621.191 | 211.229 | 257.994 | 846.051 |
CAR5 | Developing grain, bracts removed (5 DPA) | 801.07 | 885.782 | 843.449 | 861.031 |
CAR15 | Developing grain, bracts removed (15 DPA) | 276.122 | 267.648 | 226.427 | 626.722 |
CDS Structure of MLOC_19772
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_19772.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g49890.2 |
-1 |
4e-135 |
394 |
185/189 (98%) |
13105.m05345 protein ras-related protein, putative, expressed |
TAIR PP10 |
AT5G55190.1 |
-1 |
4e-130 |
382 |
179/189 (95%) |
| Symbols: RAN3, ATRAN3 | RAN GTPase 3 | chr5:22392285-22393957 FORWARD LENGTH=221 |