MLOC_1975 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.1425690.06479120.142273
LEAShoots from the seedlings (10 cm shoot stage)0.3036180.26748800.257957
INF1Young developing inflorescences (5mm)0.3505540.04381290.291320.201115
INF2Developing inflorescences (1-1.5 cm)0.3783120.6283370.2864760.585775
ROORoots from the seedlings (10 cm shoot stage)00.1151080.135220.160314
NODDeveloping tillers at six leaf stage, 3rd internode0.06772570.07900260.02618390.194047
CAR5Developing grain, bracts removed (5 DPA)0.04846650.09102260.2399240.143728
CAR15Developing grain, bracts removed (15 DPA)0.4801930.5400150.57531.40758



CDS Structure of MLOC_1975






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_1975.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_1975.1CUST_9819_PI427708080AvailableAvailablecontig_117571 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g02490.1 -2 9e-77 262 139/320 (43%) 13107.m00173 protein retrotransposon protein, putative, unclassified
TAIR PP10None-----