MLOC_1974 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1394340.7353680.4854570.523887
LEAShoots from the seedlings (10 cm shoot stage)00.22643200.170794
INF1Young developing inflorescences (5mm)0.1975290.2212510.1221790.195514
INF2Developing inflorescences (1-1.5 cm)0.3784180.3608520.3489980.495652
ROORoots from the seedlings (10 cm shoot stage)00.14630500.614044
NODDeveloping tillers at six leaf stage, 3rd internode00.1375370.09393690.569504
CAR5Developing grain, bracts removed (5 DPA)0.1190370.4414630.1194810.254589
CAR15Developing grain, bracts removed (15 DPA)0.5633170.419050.1361831.16516



CDS Structure of MLOC_1974






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK369875
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369875CUST_25387_PI427708080NoneNoneNone
MLOC_1648.1NoneAvailableNonecontig_1145962 (Not mapped)
MLOC_1974.1NoneAvailableAvailablecontig_117571 (Mapped)
MLOC_25022.1NoneAvailableNonecontig_166666 (Mapped)
MLOC_25024.1NoneAvailableNonecontig_166666 (Mapped)
MLOC_25919.1NoneAvailableNonecontig_1721789 (Mapped)
MLOC_29187.1NoneAvailableNonecontig_1983382 (Mapped)
MLOC_29861.1NoneAvailableNonecontig_2043605 (Not mapped)
MLOC_34779.1NoneAvailableNonecontig_2445668 (Not mapped)
MLOC_36273.1NoneAvailableNonecontig_2543495 (Not mapped)
MLOC_37299.1NoneAvailableNonecontig_2548130 (Mapped)
MLOC_42646.1NoneAvailableNonecontig_2655842 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----