MLOC_19721 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.210903000.35288
LEAShoots from the seedlings (10 cm shoot stage)0.338870.3544350.5751850.376098
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)1.085970.098412500.557329
NODDeveloping tillers at six leaf stage, 3rd internode00.1155380.1704650.614031
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_19721






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_19721.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_19721.1CUST_9815_PI427708080AvailableAvailablecontig_1586185 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g04540.1 +2 3e-50 173 86/115 (75%) 13108.m00435 protein decarboxylase, putative, expressed
TAIR PP10 AT4G28680.4 +2 4e-26 105 52/107 (49%) | Symbols: TYRDC | L-tyrosine decarboxylase | chr4:14155184-14158546 FORWARD LENGTH=538