MLOC_19714 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.8252915.097912.30819.45131
LEAShoots from the seedlings (10 cm shoot stage)11.08756.379336.412395.95075
INF1Young developing inflorescences (5mm)40.681838.77932.583525.3064
INF2Developing inflorescences (1-1.5 cm)26.931426.912423.995623.4891
ROORoots from the seedlings (10 cm shoot stage)4.479289.480358.913957.91206
NODDeveloping tillers at six leaf stage, 3rd internode1.877132.393344.658057.80863
CAR5Developing grain, bracts removed (5 DPA)18.324317.136119.8513.9358
CAR15Developing grain, bracts removed (15 DPA)4.722214.217324.665298.04623



CDS Structure of MLOC_19714






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_19714.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_19714.1CUST_9813_PI427708080AvailableAvailablecontig_158616 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g08050.1 -2 0.0 822 478/657 (73%) 13107.m00794 protein expressed protein
TAIR PP10 AT5G48120.1 -2 0.0 624 412/1148 (36%) ARM repeat superfamily protein | chr5:19508210-19514774 REVERSE LENGTH=1134