MLOC_19700 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains19.799173.744167.835564.1961
LEAShoots from the seedlings (10 cm shoot stage)112.23729.205928.516651.2244
INF1Young developing inflorescences (5mm)49.347.451945.024242.1186
INF2Developing inflorescences (1-1.5 cm)65.919366.016756.517673.7027
ROORoots from the seedlings (10 cm shoot stage)24.783349.049131.235659.4205
NODDeveloping tillers at six leaf stage, 3rd internode410.733387.473236.7051335.08
CAR5Developing grain, bracts removed (5 DPA)75.840966.439269.235373.2836
CAR15Developing grain, bracts removed (15 DPA)18.59713.766115.433838.7733



CDS Structure of MLOC_19700






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_19700.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_19700.3CUST_9812_PI427708080AvailableAvailablecontig_158609 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g64320.1 -2 1e-158 494 278/364 (76%) 13103.m07146 protein expressed protein
TAIR PP10 AT5G43310.3 -2 9e-86 294 161/320 (50%) COP1-interacting protein-related | chr5:17379883-17385387 REVERSE LENGTH=1164