MLOC_19686 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.5956160.7279120.8997550.733871
LEAShoots from the seedlings (10 cm shoot stage)1.332321.108860.692220.913188
INF1Young developing inflorescences (5mm)4.435754.934784.735033.69866
INF2Developing inflorescences (1-1.5 cm)4.952395.919855.533965.9832
ROORoots from the seedlings (10 cm shoot stage)0.2129850.7641810.3872980.803019
NODDeveloping tillers at six leaf stage, 3rd internode0.6622340.7380490.5365882.27666
CAR5Developing grain, bracts removed (5 DPA)1.445521.317361.367941.36321
CAR15Developing grain, bracts removed (15 DPA)0.3902350.2003350.3045420.65504



CDS Structure of MLOC_19686






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_19686.5
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_19686.5CUST_9811_PI427708080AvailableAvailablecontig_158601 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g46030.1 +3 0.0 2092 1219/1668 (73%) 13105.m04899 protein myosin head family protein, expressed
TAIR PP10 AT1G08730.1 +3 3e-162 547 308/550 (56%) | Symbols: XIC, ATXIC | Myosin family protein with Dil domain | chr1:2779963-2788325 FORWARD LENGTH=1538