- Predicted Gene MLOC_19653
MLOC_19653 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_19653_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_19653_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 10.0159 | 8.14782 | 9.93139 | 8.00408 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 13.0633 | 17.8099 | 17.8411 | 12.4584 |
INF1 | Young developing inflorescences (5mm) | 5.04049 | 7.88908 | 8.06084 | 4.94425 |
INF2 | Developing inflorescences (1-1.5 cm) | 3.42657 | 3.18809 | 3.59675 | 3.24153 |
ROO | Roots from the seedlings (10 cm shoot stage) | 23.8985 | 22.6457 | 25.2784 | 25.7628 |
NOD | Developing tillers at six leaf stage, 3rd internode | 32.661 | 32.2394 | 38.3387 | 104.232 |
CAR5 | Developing grain, bracts removed (5 DPA) | 9.83155 | 8.84141 | 10.5179 | 8.28817 |
CAR15 | Developing grain, bracts removed (15 DPA) | 8.82564 | 7.97577 | 7.5322 | 17.9995 |
CDS Structure of MLOC_19653
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_19653.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g35020.2 |
+1 |
3e-66 |
214 |
98/106 (92%) |
13111.m09171 protein yippee zinc-binding protein, putative, expressed |
TAIR PP10 |
AT4G27745.1 |
+1 |
8e-56 |
186 |
85/106 (80%) |
Yippee family putative zinc-binding protein | chr4:13840530-13841279 FORWARD LENGTH=106 |