- Predicted Gene MLOC_19618
MLOC_19618 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_19618_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_19618_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 19.042 | 26.6766 | 24.6846 | 31.294 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 19.2014 | 13.1172 | 7.80796 | 12.226 |
INF1 | Young developing inflorescences (5mm) | 46.6042 | 47.908 | 48.9675 | 50.9407 |
INF2 | Developing inflorescences (1-1.5 cm) | 47.4873 | 51.8494 | 53.6765 | 70.9486 |
ROO | Roots from the seedlings (10 cm shoot stage) | 16.9289 | 23.2146 | 26.4242 | 31.7044 |
NOD | Developing tillers at six leaf stage, 3rd internode | 31.3975 | 37.9301 | 16.6788 | 97.8224 |
CAR5 | Developing grain, bracts removed (5 DPA) | 15.5888 | 14.7429 | 15.1227 | 18.8028 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.52647 | 1.54761 | 2.58772 | 6.29315 |
CDS Structure of MLOC_19618
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_19618.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g39090.1 |
+1 |
0.0 |
538 |
265/276 (96%) |
13105.m04114 protein CAMK_CAMK_like.29 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
TAIR PP10 |
AT3G51850.1 |
+1 |
1e-166 |
477 |
230/258 (89%) |
| Symbols: CPK13 | calcium-dependent protein kinase 13 | chr3:19232667-19235526 FORWARD LENGTH=528 |