MLOC_19580 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains24.85432.270833.129925.7636
LEAShoots from the seedlings (10 cm shoot stage)17.02375.936757.735688.52299
INF1Young developing inflorescences (5mm)40.796240.090342.493929.1707
INF2Developing inflorescences (1-1.5 cm)43.105548.147247.871243.6943
ROORoots from the seedlings (10 cm shoot stage)12.278522.471918.121721.5929
NODDeveloping tillers at six leaf stage, 3rd internode19.491116.4478.6467950.4261
CAR5Developing grain, bracts removed (5 DPA)39.849635.340938.667831.8554
CAR15Developing grain, bracts removed (15 DPA)7.717477.891129.4714115.1548



CDS Structure of MLOC_19580






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK374641
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374641CUST_22704_PI427708080NoneNoneNone
MLOC_19580.1NoneAvailableAvailablecontig_1585493 (Mapped)
MLOC_40508.1NoneAvailableNonecontig_2560527 (Mapped)
MLOC_68124.1NoneAvailableNonecontig_54249 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----