- Predicted Gene MLOC_19561
MLOC_19561 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_19561_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_19561_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 85.5862 | 54.2413 | 60.8452 | 67.2284 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 35.6155 | 42.819 | 38.4958 | 36.7595 |
INF1 | Young developing inflorescences (5mm) | 22.3371 | 23.0828 | 24.362 | 21.6779 |
INF2 | Developing inflorescences (1-1.5 cm) | 18.2394 | 16.7686 | 18.4582 | 21.0515 |
ROO | Roots from the seedlings (10 cm shoot stage) | 66.988 | 46.1069 | 45.8118 | 65.3439 |
NOD | Developing tillers at six leaf stage, 3rd internode | 21.6006 | 21.6869 | 16.1441 | 72.2754 |
CAR5 | Developing grain, bracts removed (5 DPA) | 22.4284 | 22.4289 | 23.5204 | 25.0161 |
CAR15 | Developing grain, bracts removed (15 DPA) | 11.1432 | 11.454 | 11.9044 | 28.7633 |
CDS Structure of MLOC_19561
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_19561.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g17190.1 |
-3 |
6e-64 |
203 |
119/124 (96%) |
13101.m01929 protein OsCam3 - Calmodulin, expressed |
TAIR PP10 |
AT2G27030.3 |
-3 |
1e-66 |
211 |
121/130 (93%) |
| Symbols: CAM5 | calmodulin 5 | chr2:11532069-11534176 FORWARD LENGTH=181 |