- Predicted Gene MLOC_19548
MLOC_19548 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_19548_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_19548_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 149.974 | 197.738 | 204.959 | 173.227 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 138.482 | 90.59 | 79.4707 | 86.1894 |
INF1 | Young developing inflorescences (5mm) | 223.466 | 227.329 | 224.624 | 173.164 |
INF2 | Developing inflorescences (1-1.5 cm) | 181.05 | 184.55 | 203.039 | 189.448 |
ROO | Roots from the seedlings (10 cm shoot stage) | 73.3498 | 138.194 | 144.223 | 147.088 |
NOD | Developing tillers at six leaf stage, 3rd internode | 139.213 | 109.33 | 138.863 | 396.312 |
CAR5 | Developing grain, bracts removed (5 DPA) | 227.733 | 230.235 | 226.258 | 204.187 |
CAR15 | Developing grain, bracts removed (15 DPA) | 92.1467 | 88.0581 | 84.74 | 186.434 |
CDS Structure of MLOC_19548
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_19548.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g09940.1 |
-2 |
0.0 |
737 |
359/394 (91%) |
13108.m01050 protein GTP-binding protein, putative, expressed |
TAIR PP10 |
AT1G30580.1 |
-2 |
0.0 |
668 |
325/394 (82%) |
GTP binding | chr1:10831953-10835454 REVERSE LENGTH=394 |