MLOC_1954 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 28.2829 | 18.9368 | 22.2671 | 21.37 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 40.7616 | 14.4 | 19.9284 | 19.844 |
| INF1 | Young developing inflorescences (5mm) | 8.33336 | 8.26124 | 7.57773 | 6.78983 |
| INF2 | Developing inflorescences (1-1.5 cm) | 6.54173 | 8.44181 | 9.36848 | 8.46429 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 56.8613 | 36.1522 | 46.7214 | 42.0754 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 72.7234 | 72.0204 | 65.3519 | 175.533 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 31.9208 | 39.8112 | 33.647 | 33.275 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 32.9835 | 33.7182 | 30.9807 | 79.7494 |
CDS Structure of MLOC_1954
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_1954.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g31820.1 |
+2 |
4e-23 |
93 |
58/69 (84%) |
13104.m03041 protein hypothetical protein |
| TAIR PP10 |
AT3G48660.1 |
+2 |
4e-18 |
79 |
46/69 (67%) |
Protein of unknown function (DUF 3339) | chr3:18029659-18030133 FORWARD LENGTH=89 |
