- Predicted Gene MLOC_19482
MLOC_19482 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.66387 | 0.874784 | 0.735313 | 1.15085 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.0612844 | 0 | 0 | 0.0543244 |
| INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0.0315121 | 0.233174 | 0.1524 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.7009 | 4.02877 | 1.70688 | 4.93395 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.024886 | 0.0391142 | 0 | 0.139784 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.0383236 | 0.328213 | 0.573451 | 0.445213 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.5013 | 0.664495 | 0.423396 | 2.54217 |
CDS Structure of MLOC_19482
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_19482.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g46480.2 |
-3 |
2e-52 |
175 |
113/174 (65%) |
13105.m04962 protein late embryogenesis abundant protein, group 3, putative, expressed |
| TAIR PP10 |
AT3G15670.1 |
-3 |
9e-32 |
120 |
87/213 (41%) |
Late embryogenesis abundant protein (LEA) family protein | chr3:5310141-5310901 REVERSE LENGTH=225 |